PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.D00607.1.p
Common NameEUGRSUZ_D00607, LOC104440999
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family Dof
Protein Properties Length: 295aa    MW: 31106.9 Da    PI: 9.6835
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.D00607.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.81.4e-393291362
            zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                      ++ +kcprCds+ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rk k+s+
  Eucgr.D00607.1.p 32 HQPQKCPRCDSMNTKFCYYNNYSLSQPRYFCKTCRRYWTHGGTLRNVPVGGGCRKAKRSK 91
                      6889*****************************************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027011.2E-333389IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.043589IPR003851Zinc finger, Dof-type
ProDomPD0074788.0E-233685IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103773IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MEQESKPPPL DRRPTSRPAQ PDGQQQPPPP HHQPQKCPRC DSMNTKFCYY NNYSLSQPRY  60
FCKTCRRYWT HGGTLRNVPV GGGCRKAKRS KSSSSSSSTS ASASSGDSLT PHSSLQVLPQ  120
SLRDVAAGNL APPPAAAAGE GPLGYSFYPG GGFLSSLAAV QSINQSQPFN IGGATTSNNN  180
SSNNLGFFQG FGGLASLSSS HHHQQIHQQA QFLQSDWSHG FGMGSNANTG SSSSNNNSPT  240
ISHVHHQHGN LWSGSTSAGI SGHGGGESNR IGLNVNRPSD HHHLPHLPGF GPPP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.D00607.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010052293.10.0PREDICTED: dof zinc finger protein DOF5.6-like
TrEMBLA0A059CE520.0A0A059CE52_EUCGR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM15986915
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.16e-30TARGET OF MONOPTEROS 6